OME 2024 NGFF Challenge

15234 zarrs in 17 collections

Icon from Webknossos Webknossos: 77 images
webknossos_samples.csv
Icon from BioImage Archive BioImage Archive: 10 images
ebi-ngff-challenge-samples.csv
Icon from JAX JAX: 6897 images
KOMP_histopathology.csv
Icon from JAX JAX: 6365 images
KOMP_adult_lacZ.csv
Icon from IDR IDR: 7 images
other_samples.csv
Icon from IDR IDR: 83 plates
idr0015_samples.csv
Icon from IDR IDR: 68 plates
idr0012_samples.csv
Icon from IDR IDR: 22 plates
idr0090_samples.csv
Icon from IDR IDR: 46 plates
idr0004_samples.csv
Icon from IDR IDR: 111 images
idr0026_samples.csv
Icon from IDR IDR: 20 plates
idr0036_samples.csv
Icon from IDR IDR: 5 images
idr0051_samples.csv
Icon from IDR IDR: 147 plates
idr0010_samples.csv
Icon from IDR IDR: 182 plates
idr0011_samples.csv
Icon from IDR IDR: 1127 images
idr0157_samples.csv
Icon from IDR IDR: 12 plates
idr0033_samples.csv
Icon from IDR IDR: 55 plates
idr0035_samples.csv

Loading samples from https://raw.githubusercontent.com/will-moore/ome2024-ngff-challenge/samples_viewer/samples/ngff_samples.csv

Zarr Samples (URLs) Images Bytes written Organisms
17 10318 505.30 TB
Thumb Data Origin Shape Images Organism Imaging
webknossos_samples.csv (77) Webknossos ...f782d69ebc 1,11333,23573,2494 315.47 TB
ebi-ngff-challenge-samples.csv (10) BioImage Archive 163,2,1,1024,1024 40.40 GB
KOMP_histopathology.csv (6897) JAX ...age-176894 1,3,1,55296,96000 72.67 TB
KOMP_adult_lacZ.csv (6365) JAX ...mage-11164 1,3,1,46080,113280 93.38 TB
other_samples.csv (7) IDR 2,236,275,271 123.78 GB
idr0015_samples.csv (83) IDR ...plate-4851 1,5,20,2048,2048 2.75 TB 396 396
idr0012_samples.csv (68) IDR ...plate-4309 1,3,1,1024,1344 256.03 GB 336 672
idr0090_samples.csv (22) IDR ...plate-9301 5,31,2044,2048 11.44 TB 49 1568
idr0004_samples.csv (46) IDR ...plate-1795 2,10,510,672 13.97 GB 90 90
idr0026_samples.csv (111) IDR ...ge-3261742 30,4,27,507,507 149.49 GB
idr0036_samples.csv (20) IDR ...plate-4890 5,520,696 159.77 GB 384 3456
idr0051_samples.csv (5) IDR ...ge-4007817 79,1,201,333,333 8.36 GB
idr0010_samples.csv (147) IDR ...plate-5912 1,2,1,520,696 38.33 GB 384 384
idr0011_samples.csv (182) IDR ...plate-5532 1,3,21,512,672 295.58 GB 48 48
idr0157_samples.csv (1127) IDR 1,3,80,5464,8192 8.17 TB
idr0033_samples.csv (12) IDR ...plate-5960 1,5,1,1080,1080 331.97 GB 384 3456
idr0035_samples.csv (55) IDR ...plate-6276 1,3,1,1024,1280 49.47 GB 60 240