OME 2024 NGFF Challenge

15234 zarrs in 17 collections

BioImage Archive: 10 images

ebi-ngff-challenge-samples.csv

Webknossos: 77 images

webknossos_samples.csv

JAX: 6365 images

KOMP_adult_lacZ.csv

JAX: 6897 images

KOMP_histopathology.csv

other_samples.csv

idr0090_samples.csv

idr0004_samples.csv

IDR: 147 plates

idr0010_samples.csv

idr0015_samples.csv

IDR: 182 images

idr0011_samples.csv

idr0033_samples.csv

idr0012_samples.csv

idr0035_samples.csv

idr0051_samples.csv

IDR: 1127 images

idr0157_samples.csv

idr0036_samples.csv

IDR: 111 images

idr0026_samples.csv

Loading samples from https://raw.githubusercontent.com/will-moore/ome2024-ngff-challenge/samples_viewer/samples/ngff_samples.csv

Zarr Samples (URLs)	Images	Bytes written	Organisms
17	6577	420.74 TB

Thumb			Data Origin	Shape			Images	Organism	Imaging
	ebi-ngff-challenge-samples.csv (10)	BioImage Archive		163,2,1,1024,1024	40.40 GB
	webknossos_samples.csv (77)	Webknossos	...f782d69ebc	x	315.47 TB
	KOMP_adult_lacZ.csv (6365)	JAX	...mage-11164	1,3,1,46080,113280	40.96 TB
	KOMP_histopathology.csv (6897)	JAX	...age-176894	1,3,1,55296,96000	40.52 TB
	other_samples.csv (7)	IDR		2,236,275,271	123.78 GB
	idr0090_samples.csv (22)	IDR	...plate-9301	5,31,2044,2048	11.44 TB	49	1568
	idr0004_samples.csv (46)	IDR	...plate-1795	2,10,510,672	13.97 GB	90	90
	idr0010_samples.csv (147)	IDR	...plate-5912	1,2,1,520,696	38.33 GB	384	384
	idr0015_samples.csv (83)	IDR	...plate-4851	1,5,20,2048,2048	2.75 TB	396	396
	idr0011_samples.csv (182)	IDR	...plate-5532		295.58 GB
	idr0033_samples.csv (12)	IDR	...plate-5960	1,5,1,1080,1080	331.97 GB	384	3456
	idr0012_samples.csv (68)	IDR	...plate-4309	1,3,1,1024,1344	256.03 GB	336	672
	idr0035_samples.csv (55)	IDR	...plate-6276		49.47 GB
	idr0051_samples.csv (5)	IDR	...ge-4007817	79,1,201,333,333	8.36 GB
	idr0157_samples.csv (1127)	IDR		1,3,80,5464,8192	8.17 TB
	idr0036_samples.csv (20)	IDR	...plate-4890		159.77 GB
	idr0026_samples.csv (111)	IDR	...ge-3261742		149.49 GB